1.75 takes less force to extrude, but commensurately cannot transmit as much force. Also has a higher tendency to buckle under stress, and increased issues with ooze.
3mm has less issues with buckling and retraction, but requires greater force to extrude - increased stress on the components. Since it’s Bowden, I see no problem with increasing the stepper size to compensate for force/speed issues.
Does anyone have experience with both? eMaker is 1.75, Ultimakers are 3mm - obviously both work, what isn’t obvious is which one is better. I’m leaning towards 3mm because it’s cheaper, towards 1.75 because it can be direct-driven with a nema 17.